CDS

Accession Number TCMCG057C35180
gbkey CDS
Protein Id XP_018434438.1
Location complement(join(38272220..38272293,38272388..38272454,38272542..38272640,38272742..38272812,38272912..38273002,38273091..38273140,38273241..38273349,38273433..38273525,38273597..38273660,38273757..38273976,38274056..38274130,38274224..>38274341))
Gene LOC108806750
GeneID 108806750
Organism Raphanus sativus

Protein

Length 426aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018578936.1
Definition PREDICTED: histone deacetylase 9 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category B
Description Belongs to the histone deacetylase family. HD Type 1 subfamily
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K06067        [VIEW IN KEGG]
EC 3.5.1.98        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko04110        [VIEW IN KEGG]
ko04213        [VIEW IN KEGG]
ko04330        [VIEW IN KEGG]
ko04919        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
ko05034        [VIEW IN KEGG]
ko05165        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05202        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
ko05220        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04213        [VIEW IN KEGG]
map04330        [VIEW IN KEGG]
map04919        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
map05034        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05202        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
map05220        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006476        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010029        [VIEW IN EMBL-EBI]
GO:0010187        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016575        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0035601        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070932        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098732        [VIEW IN EMBL-EBI]
GO:1900055        [VIEW IN EMBL-EBI]
GO:1900140        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1990619        [VIEW IN EMBL-EBI]
GO:2000024        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
CGTCCACACAAGGCATACCCTATCGAGATGGCCCAGTTCCATTCCCCAGACTATGTCGAGTTCCTCCAACGTATCAACCCTGAAAACACTGATTTGTTTCCCAACGAAATGGCTAGATATAATTTAGGAGAGGATTGTCCTGTCTTTGAGGATATGTTTGAGTTTTGTCAAATTTATGCCGGCGCTACCATAGATGCTGCACGCAGATTAAACAACAAACTATGTGACATTGCCATAAACTGGGCGGGCGGGTTGCACCATGCTAAAAAATGCGATGCGTCTGGTTTCTGTTACATCAACGATCTCGTGCTAGGTATTCTCGAGCTCTTGAAACACCATCCTCGTGTGCTCTACATTGATATAGACGTCCATCACGGTGATGGAGTCGAAGAGGCCTTTTACTTTACTGACAGAGTGATGACTGTTAGCTTTCACAAGTTTGGGGATAAGTTCTTTCCAGGAACCGGCGATGTTAAGGAAATAGGAGAAAGGGAAGGGAAGTTTTACGCCATAAATGTTCCGCTCAGGGATGGTATTGATGACAGTAGTTTCAACCGTCTCTTCAGGGCGATAATTTCGAAGGTGGTTGAGATATATCAGCCAGGTGCAATAGTACTTCAGTGTGGAGCAGATTCACTAGCAAGGGATCGACTAGGATGCTTTAATCTCTCTATTGATGGACATGCTGAATGTGTTAAATTTGTCAAGAAGTTCAATATTCCTTTGCTGGTGACTGGAGGTGGAGGGTACACAAAGGAGAACGTAGCTCGGTGTTGGACCGTTGAGACTGGCATTCTTTTGGACACTGAACTTCCTAATGAGATTCCAGATAATGATTACATAAAGTATTTTGGGCCGGATTATTCATTGAAGATTCCTGGTGGTCACATTGAGAATCTAAATACGAAATCGTATATCAGTACGATAAAAGCACAGATTTTGGATAATTTGCGATACATCCAGCACGCTCCAAGCGTGCAGATGCAGGAGGTTCCACCGGATTTCTACATACCGGATTTTGATGAAGACCAACAAAATCCAGATGTGCGTGTGGACCAGCGTTCGCGGGATAAGCAGATTCAGAGGGACGATGAATATTTCGATGGTGACAAGGATAACGATGCGTCGTAG
Protein:  
MRSKDKISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFLQRINPENTDLFPNEMARYNLGEDCPVFEDMFEFCQIYAGATIDAARRLNNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLRDGIDDSSFNRLFRAIISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPDNDYIKYFGPDYSLKIPGGHIENLNTKSYISTIKAQILDNLRYIQHAPSVQMQEVPPDFYIPDFDEDQQNPDVRVDQRSRDKQIQRDDEYFDGDKDNDAS